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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs28532106 chr3:124364828 A/G 4.83E-5 497 37.18 40.05 18.7 KM Plot
KIRC rs28591236 chr11:1561353 C/T 9.07E-5 505 37.47 37.2 5.47 KM Plot
KIRC rs28605011 chr11:1539714 A/G 8.08E-5 509 5.47 37.37 37.47 KM Plot
KIRC rs28707042 chr11:1539474 A/G 8.08E-5 509 5.47 37.37 37.47 KM Plot
KIRC rs28759711 chr3:48245687 A/G 6.69E-5 490 39.62 32.23 19.13 KM Plot
KIRC rs2878233 chr11:1516094 T/C 8.53E-5 507 5.47 37.37 37.33 KM Plot
KIRC rs2878234 chr11:1503627 T/C 8.43E-5 507 5.47 37.53 37.33 KM Plot
KIRC rs2882377 chr12:29425584 C/T 5.51E-9 506 37.7 37.47 6.07 KM Plot
KIRC rs28863021 chr2:109457774 A/G 8.35E-12 505 37.7 26.3 2.3 KM Plot
KIRC rs2933308 chr3:11055624 A/G 4.16E-5 509 32.85 38.83 34.13 KM Plot
KIRC rs3017281 chr11:125439423 T/C 6.89E-6 505 1.43 37.6 37.18 KM Plot
KIRC rs3081373 chr11:1537438 C/CCT 7.8E-5 508 5.47 37.37 37.47 KM Plot
KIRC rs3096146 chr16:23612720 A/G 6.34E-10 503 37.5 37.68 2.43 KM Plot
KIRC rs3197223 chr3:48335857 C/T 4.32E-5 503 37.6 37.77 21.12 KM Plot
KIRC rs320890 chr19:37704100 G/A 8.58E-5 505 40 29.5 20 KM Plot